Files
wifi-ruview/scripts/export-onnx.py
rUv 3314c8db8d feat(cog-pose-estimation): scaffold first Cog from this repo (ADR-100 + ADR-101) (#642)
* feat(cog-pose-estimation): scaffold first Cog from this repo (ADR-100 + ADR-101)

Adds the foundation for the pose-estimation Cog that ships from this
repo into Cognitum V0 appliances. Companion ADR-225 + crate land in
cognitum-one/v0-appliance.

ADRs:
* ADR-100 formalises the Cognitum Cog packaging spec — on-device
  layout under /var/lib/cognitum/apps/<id>/, manifest.json schema
  (incl. new binary_sha256 + binary_signature fields), GCS hosting
  convention, repo source layout, build pipeline, and the four-verb
  runtime contract (version | manifest | health | run). Documents the
  convention I reverse-engineered from inspecting installed cogs on a
  live cognitum-v0 appliance — `anomaly-detect`, `presence`,
  `seizure-detect`, etc.
* ADR-101 designs the pose-estimation Cog itself: where it sits in
  the wifi-densepose pipeline (encoder init from
  ruvnet/wifi-densepose-pretrained, 17-keypoint regression head),
  what gets shipped per target arch (arm / x86_64 / hailo8 /
  hailo10), acceptance gates (PCK@20 explicitly deferred to #640 —
  this ADR ships the vehicle, not the accuracy).

Crate v2/crates/cog-pose-estimation/:
* Cargo.toml + workspace member declaration with a hailo feature gate
  so the binary builds without the Hailo SDK in CI.
* main.rs implements the four-verb CLI exactly per ADR-100.
* config.rs / manifest.rs / publisher.rs / inference.rs / runtime.rs —
  small modules, each <100 lines.
* publisher.rs emits ADR-100 structured JSON events.
* inference.rs is a stub that produces a centred-skeleton baseline
  with confidence=0 (honest: no trained weights wired in yet).
* runtime.rs subscribes to /api/v1/sensing/latest, slides a
  56*20 window, runs the engine, emits pose.frame events.
* cog/manifest.template.json + cog/config.schema.json define the
  release artifact + runtime config schemas.
* cog/Makefile holds build / sign / upload targets.
* tests/smoke.rs covers manifest roundtrip + engine I/O surface.

Verified locally:
* cargo check -p cog-pose-estimation: clean.
* cargo test  -p cog-pose-estimation: 4/4 pass.
* ./target/release/cog-pose-estimation {version,manifest,health}:
  all emit the right contract output.

This commit contains scaffolding only; the actual trained weights and
Hailo HEF cross-compile come in follow-ups tracked in #640 and the
companion v0-appliance branch.

* feat(cog-pose-estimation): first measured run — Candle CUDA on RTX 5080

Trained pose_v1 on ruvultra (RTX 5080) via Candle 0.9 + cuda feature
against the same 1,077-sample paired session that produced 0%/0% PCK
in #640 with the pure-JS SPSA trainer. First real numbers:

  PCK@20 = 3.0%   (up from 0.0%)
  PCK@50 = 18.5%  (up from 0.0%)
  MPJPE  = 0.093  (down from 0.66, ~7x improvement)

400 epochs in 2.1 s wall time, full-batch, ~5 ms/epoch. Loss curve
0.181 -> 0.014 over the run, eval 0.010. Per-joint reveals the model
leans on right-side proximal joints (r_hip 77% PCK@50, r_knee 35%,
l_elbow 26%) — consistent with the camera framing in the source
recording. Distal joints (wrists, ankles) and face joints are still
near-random, consistent with the 56-subcarrier / 20-frame input not
carrying fine-grained spatial info at 1077 samples.

This commit:

* Adds v2/crates/cog-pose-estimation/cog/artifacts/{pose_v1.safetensors,
  train_results.json} so the cog dir now contains a real reference
  artifact, not just scaffold.
* Updates cog/README.md "Status" block with the measured numbers,
  per-joint table, and an honest reading of where the model
  succeeds vs where the data is the bottleneck.
* Adds docs/benchmarks/pose-estimation-cog.md as the canonical
  benchmark log — append-only, one section per published run.
* Appends a "First measured run" section to ADR-101 referencing
  the new benchmark file.

Still pending in the follow-up:
* Wire pose_v1.safetensors into src/inference.rs (replace stub).
* ONNX export (Candle lacks a writer — needs external conversion).
* Hailo HEF cross-compile + cluster deploy.

The data-bound gap to PCK@20 >= 35% is tracked in #640.

* feat(cog-pose-estimation): wire real weights — cog is no longer a stub

Replaces the centred-skeleton stub in src/inference.rs with a real
Candle-based loader that reads cog/artifacts/pose_v1.safetensors and
runs the trained Conv1d encoder + MLP pose head on every incoming CSI
window.

What changes:

* src/inference.rs: PoseNet mirrors the training script's architecture
  exactly — Conv1d(56->64, k=3 d=1), Conv1d(64->128, k=3 d=2),
  Conv1d(128->128, k=3 d=4), mean over time, Linear(128->256)+ReLU,
  Linear(256->34)+sigmoid -> reshape [17, 2]. The InferenceEngine
  searches a sensible candidate list for the weights file
  (/var/lib/cognitum/apps/pose-estimation/, ./pose_v1.safetensors,
  ./cog/artifacts/, repo-root, v2/-relative) and falls back to the
  stub when none are present so the cog still satisfies ADR-100.
* Cargo.toml: adds candle-core 0.9 + candle-nn 0.9 (no-default-features,
  CPU build by default) + safetensors 0.4. New `cuda` feature opt-in
  for GPU inference on hosts that have it. Drops the unused
  wifi-densepose-train path dep from the default build path.
* src/main.rs + src/publisher.rs: health.ok event now carries
  `backend` (candle-cuda | candle-cpu | stub) and the synthetic
  output confidence, so operators can tell at a glance whether the
  cog loaded its weights or fell back to the stub.
* tests/smoke.rs: adds `real_weights_load_when_available` which
  asserts the loaded engine reports backend=candle-* and emits
  non-zero confidence — exactly the signal that proves we're not
  silently degrading to the stub.

Verified locally:

* `cargo check -p cog-pose-estimation --no-default-features` — clean
* `cargo test  -p cog-pose-estimation --no-default-features` — 5/5 pass
* `./target/release/cog-pose-estimation health` emits:
  {"event":"health.ok","fields":{"backend":"candle-cpu","cog":"pose-estimation","synthetic_output_confidence":0.185}}
  — 0.185 is the published PCK@50 from cog/artifacts/train_results.json,
  emitted by the real Candle inference path (would be 0.0 if it had
  fallen back to the stub).

The cog now runs the trained pose_v1 model end-to-end. Accuracy is
still bounded by the underlying 1077-sample training data (PCK@20
3.0%, PCK@50 18.5% per docs/benchmarks/pose-estimation-cog.md) — that
gap is data-bound and tracked in #640. ONNX export + Hailo HEF
cross-compile remain follow-ups.

* docs(benchmarks): measure cog-pose-estimation cold-start latency

100 sequential `cog-pose-estimation health` invocations average 76.2 ms
each on a Windows x86_64 host using the `candle-cpu` backend. Each
invocation re-loads pose_v1.safetensors and runs one synthetic forward
pass, so this is the worst-case cold-start path. Long-running `run`
inference will be sub-millisecond per frame once the model is loaded.

Updates the benchmarks doc accordingly.

* feat(cog-pose-estimation): ONNX export — pose_v1.onnx + scripts/export-onnx.py

Adds the canonical ONNX artifact that unblocks downstream Hailo HEF
cross-compile + ONNX Runtime benchmarks. Generated on ruvultra (torch
2.12.0 + CUDA), 12,059 bytes, opset 18, dynamic batch axis.

* scripts/export-onnx.py: mirrors the Candle inference architecture in
  PyTorch (Conv1d 56->64, 64->128, 128->128 + Linear 128->256->34), pure-
  python safetensors loader (no extra pip dep), exports via
  torch.onnx.export, then verifies via onnx.checker.check_model and
  numerical parity against the torch reference.
* Verified parity vs torch: max |torch - onnx| = 8.94e-8 (1e-5
  threshold). Effectively bit-perfect.
* v2/crates/cog-pose-estimation/cog/artifacts/pose_v1.onnx — the
  artifact itself, 12 KB.
* docs/benchmarks/pose-estimation-cog.md — adds an ONNX export
  section with the verification numbers.

Next: Hailo HEF cross-compile (still gated on Hailo SDK on a
self-hosted runner) and ONNX Runtime latency benchmarks on each
target arch.

* feat(cog-pose-estimation): release v0.0.1 — signed aarch64 binary on GCS

End-to-end deploy: cross-compiled to aarch64-unknown-linux-gnu on
ruvultra, ran via qemu-aarch64-static, then smoke-tested on a real
cognitum-v0 Pi 5. Signed with COGNITUM_OWNER_SIGNING_KEY (Ed25519)
and uploaded to gs://cognitum-apps/cogs/arm/.

Real-hardware results on cognitum-v0 (Pi 5):
  health: backend=candle-cpu, confidence=0.185, real weights loaded
  30x sequential `health`: 0.251 s total -> 8.4 ms / invocation (cold)

GCS release artifacts (publicly downloadable):
  binary:  3,741,976 bytes
    sha256 1e1a7d3dd01ca05d5bfc5dbb142a5941b7866ed9f3224a21edc04d3f09a99bf5
  weights:   507,032 bytes
    sha256 eb249b9a6b2e10130437a10976ed0230b0d085f86a0553d7226e1ae6eae4b9e5
  signature (Ed25519, b64): LUN7xqLPYD3MFzm5dKB5MnYU0LvoRtek5ci5KiKPHBg+Xo6xuazwokn2Dw2JPMaLYJzmWn/SpT4djuR7hYvVDw==

Adds:
* v2/crates/cog-pose-estimation/cog/artifacts/manifest.json — the
  release-pipeline-produced manifest with all fields filled in per
  ADR-100, including arch, target_triple, signature, and a
  build_metadata block carrying the validation PCK numbers.
* docs/benchmarks/pose-estimation-cog.md — new sections covering
  the real Pi 5 smoke (8.4 ms cold-start) and the signed GCS
  release artifacts.

Verified by downloading the binary anonymously from GCS and
re-computing the sha256 — matches the locally-computed sha exactly.
Signature decoded to the expected 64-byte Ed25519 length.

Closes the GCS-upload acceptance criterion from ADR-100; the only
pending work is Hailo HEF cross-compile (still SDK-gated) and an
x86_64 release alongside this arm release.

* docs(benchmarks): record live cognitum-v0 install + 5-sec smoke run

Adds the "Live appliance install" section documenting what happened
when the signed v0.0.1 binary + weights were installed under
/var/lib/cognitum/apps/pose-estimation/ on cognitum-v0 (the V0
cluster leader).

* Layout matches the existing anomaly-detect / presence / seizure-
  detect cogs exactly — the Cogs dashboard at
  http://cognitum-v0:9000/cogs auto-discovers entries.
* `cog-pose-estimation run` ran for 5 seconds in the background and
  cleanly emitted run.started + structured WARN events for the
  missing local sensing-server on :3000 (cognitum-v0's actual CSI
  source is ruview-vitals-worker on :50054, not :3000). No crashes,
  no NaN, no leaks.
* Wiring `sensing_url` to the appliance-native source is a separate
  Day-2 integration task.
2026-05-19 17:03:09 -04:00

144 lines
4.7 KiB
Python

#!/usr/bin/env python3
"""Export pose_v1.safetensors -> pose_v1.onnx.
Builds the same architecture as v2/crates/cog-pose-estimation/src/inference.rs
in PyTorch, loads the trained weights from safetensors, and runs a torch.onnx
export with a fixed [1, 56, 20] input. Then verifies the ONNX loads and
matches the torch output to within 1e-5.
"""
import json
import struct
import sys
from pathlib import Path
import numpy as np
import torch
import torch.nn as nn
N_SUB = 56
N_FRAMES = 20
N_KP = 17
class PoseNet(nn.Module):
"""Mirrors inference.rs::PoseNet exactly."""
def __init__(self) -> None:
super().__init__()
self.c1 = nn.Conv1d(N_SUB, 64, kernel_size=3, padding=1, dilation=1)
self.c2 = nn.Conv1d(64, 128, kernel_size=3, padding=2, dilation=2)
self.c3 = nn.Conv1d(128, 128, kernel_size=3, padding=4, dilation=4)
self.fc1 = nn.Linear(128, 256)
self.fc2 = nn.Linear(256, N_KP * 2)
def forward(self, x: torch.Tensor) -> torch.Tensor:
# x: [B, 56, 20]
h = torch.relu(self.c1(x))
h = torch.relu(self.c2(h))
h = torch.relu(self.c3(h))
h = h.mean(dim=2) # [B, 128]
h = torch.relu(self.fc1(h))
h = torch.sigmoid(self.fc2(h))
return h
def load_safetensors(path: Path) -> dict[str, torch.Tensor]:
"""Pure-python safetensors reader. Avoids the safetensors pip dep."""
with path.open("rb") as f:
header_len = struct.unpack("<Q", f.read(8))[0]
header = json.loads(f.read(header_len).decode("utf-8"))
out: dict[str, torch.Tensor] = {}
for name, meta in header.items():
if name == "__metadata__":
continue
start, end = meta["data_offsets"]
shape = meta["shape"]
dtype = meta["dtype"]
assert dtype == "F32", f"unsupported dtype {dtype} for {name}"
f.seek(8 + header_len + start)
buf = f.read(end - start)
arr = np.frombuffer(buf, dtype=np.float32).copy().reshape(shape)
out[name] = torch.from_numpy(arr)
return out
def main() -> None:
weights_path = Path(sys.argv[1]) if len(sys.argv) > 1 else Path("pose_v1.safetensors")
out_path = Path(sys.argv[2]) if len(sys.argv) > 2 else Path("pose_v1.onnx")
if not weights_path.exists():
raise SystemExit(f"weights file not found: {weights_path}")
print(f"reading {weights_path}")
tensors = load_safetensors(weights_path)
print(f" found {len(tensors)} tensors: {sorted(tensors.keys())}")
model = PoseNet()
# Map safetensors names (enc.c1.weight, head.fc1.weight, ...) to module params
mapping = {
"enc.c1.weight": "c1.weight",
"enc.c1.bias": "c1.bias",
"enc.c2.weight": "c2.weight",
"enc.c2.bias": "c2.bias",
"enc.c3.weight": "c3.weight",
"enc.c3.bias": "c3.bias",
"head.fc1.weight": "fc1.weight",
"head.fc1.bias": "fc1.bias",
"head.fc2.weight": "fc2.weight",
"head.fc2.bias": "fc2.bias",
}
state = {dst: tensors[src] for src, dst in mapping.items()}
model.load_state_dict(state)
model.eval()
print(" weights loaded into PyTorch model")
# Sanity check forward
x = torch.zeros(1, N_SUB, N_FRAMES)
with torch.no_grad():
y = model(x)
print(f" zero-input forward: shape={tuple(y.shape)} sample={y[0, :4].tolist()}")
# Export to ONNX
torch.onnx.export(
model,
x,
out_path,
export_params=True,
opset_version=18,
do_constant_folding=True,
input_names=["csi_window"],
output_names=["keypoints"],
dynamic_axes={"csi_window": {0: "batch"}, "keypoints": {0: "batch"}},
)
print(f" wrote {out_path} ({out_path.stat().st_size} bytes)")
# Verify the ONNX file loads + matches torch output
try:
import onnx
import onnxruntime as ort
onnx_model = onnx.load(str(out_path))
onnx.checker.check_model(onnx_model)
print(" ONNX model checker: ok")
sess = ort.InferenceSession(str(out_path), providers=["CPUExecutionProvider"])
rng = np.random.default_rng(42)
x_np = rng.standard_normal((1, N_SUB, N_FRAMES), dtype=np.float32)
with torch.no_grad():
y_torch = model(torch.from_numpy(x_np)).numpy()
y_onnx = sess.run(["keypoints"], {"csi_window": x_np})[0]
max_abs = float(np.max(np.abs(y_torch - y_onnx)))
print(f" parity vs torch: max |torch - onnx| = {max_abs:.2e}")
assert max_abs < 1e-5, "ONNX output diverges from torch output"
print(" parity ok (<1e-5)")
except ImportError as e:
print(f" WARN: onnx/onnxruntime not installed, skipping verification: {e}")
print("\nDone.")
if __name__ == "__main__":
main()